SAPS
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Statistical Annotation of Protein Structure
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Analyze Protein Tertiary Packing
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Example
and
Tutorials
Questions:
Stephen Cammer
Enter a 4-Character PDB Code
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Or, Upload a PDB file
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Chain Id
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(Optional)
Do Protein-Protein Interface Instead of Core
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Geometry Filters
Max Residue-Residue Contact Distance
15.0
12.0
11
10
9.0
8.5
8.0
7.5
7.0
6.5
Ang.
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Volume:
Min.
ALL
50
45
40
35
30
25
20
15
10
5
Max.
ALL
50
45
40
35
30
25
20
15
10
5
Help
Tetrahedrality:
Min.
ALL
0.5
0.4
0.3
0.25
0.20
0.15
0.10
0.05
0.03
0.01
0.005
0.003
0.001
Max.
ALL
0.5
0.4
0.3
0.25
0.20
0.15
0.10
0.05
0.03
0.01
0.005
0.003
0.001
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Sequence Distance Constraints
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Sequence Segment
Min
Max
First to Second Residue
Second to Third Residue
Third to Fourth Residue
Total Length
Display Size:
S
M
L
The Virginia Bioinformatics Institute, Virginia Tech